747h...the point of shank length is an interesting one but it only comes into play when you design the bolt as a stretch bolt ,or at leaast with considerable waisting along the shank length.
I remember coming up with this idea of increasing shank length toward ARP a few years back and they put two very different length shanklength bolts(otherwise equal) into their zwick machine...and both did show exactly the same behaviour....
We concluded that only a tailor made bolt for the application could offer an advantage .
To come back to the original question ,we are aligned that inevitably the two structures will expand in different ways and they will also hava a very different
delta t in use.So we are clear that two of the needed three hardpoints would need to provide compensation in shear plane without compromising bending and torsional rigidity of the assembled structure.In my book bolting the heads to the tub via two bolts each will open a can of worms making it necessary to design scope for compensation somewhere else otherwise you will compromise the joint heavily.